- _ -

_active : simulator.diffusionSolver.DiffusionSolver
_agentGrid : simulator.agent.SpecialisedAgent
_agentGridIndex : simulator.agent.LocatedAgent
_agentToKill : simulator.AgentContainer
_biofilmDiffusivity : simulator.geometry.Domain
_biomass : simulator.diffusionSolver.Solver_multigrid
_biomassGrid : simulator.geometry.Domain
_biovolume : simulator.diffusionSolver.Solver_pressure
_birthday : simulator.agent.Agent
_bLayer : simulator.diffusionSolver.multigrid.MultigridSolute , simulator.diffusionSolver.Solver_multigrid , simulator.diffusionSolver.Solver_pressure
_boundaryLayer : simulator.geometry.Domain
_bulkValue : simulator.geometry.Bulk
_catalystIndex : simulator.reaction.Reaction
_conc : simulator.diffusionSolver.multigrid.MultigridSolute , simulator.diffusionSolver.multigrid.SinglegridPressure
_connectedBulk : simulator.geometry.boundaryConditions.BoundaryBulk , simulator.geometry.boundaryConditions.BoundaryGasMembrane
_cvf : simulator.detachment.ConnectedVolume
_D : simulator.geometry.Bulk
_diff : simulator.agent.LocatedAgent
_diffReac : simulator.diffusionSolver.multigrid.MultigridSolute
_diffUptakeRate : simulator.reaction.Reaction
_diffusivity : simulator.diffusionSolver.multigrid.MultigridSolute , simulator.diffusionSolver.multigrid.SinglegridPressure , simulator.diffusionSolver.Solver_multigrid
_diffusivityGrid : simulator.geometry.Domain
_dilationBand : simulator.geometry.Domain
_dim : utils.ComplexArray
_distCumProb : simulator.agent.LocatedAgent
_distProb : simulator.agent.LocatedAgent
_divisionDirection : simulator.agent.LocatedAgent
_domain : simulator.diffusionSolver.multigrid.MultigridSolute , simulator.diffusionSolver.multigrid.SinglegridPressure , simulator.diffusionSolver.Solver_chemostat , simulator.diffusionSolver.Solver_multigrid , simulator.diffusionSolver.Solver_pressure
_domainGrid : simulator.geometry.Domain
_epsSpecies : simulator.agent.zoo.Bacterium
_erosionGrid : simulator.AgentContainer
_family : simulator.agent.Agent
_genealogy : simulator.agent.Agent
_generation : simulator.agent.Agent
_guild : simulator.reaction.Reaction
_guildGrid : simulator.reaction.Reaction
_hasEps : simulator.agent.zoo.Bacterium
_hasInert : simulator.agent.zoo.Bacterium
_host : simulator.agent.zoo.Episome , simulator.agent.zoo.MultiEpisome
_i : simulator.geometry.Domain
_index : simulator.geometry.GridElementFloat
_is3D : simulator.SpatialGrid
_isAttached : simulator.agent.LocatedAgent
_isConstant : simulator.geometry.Bulk
_isRepressed : simulator.agent.zoo.Episome
_isSupport : simulator.geometry.boundaryConditions.AllBC
_itau : simulator.diffusionSolver.multigrid.MultigridSolute
_j : simulator.geometry.Domain
_k : simulator.geometry.Domain
_kineticParam : simulator.reaction.Reaction
_l : utils.ComplexArray
_lastStep : simulator.agent.Agent
_levelset : simulator.AgentContainer
_location : simulator.agent.LocatedAgent
_m : utils.ComplexArray
_movement : simulator.agent.LocatedAgent
_myDeathRadius : simulator.agent.LocatedAgent
_myDivRadius : simulator.agent.LocatedAgent
_myNeighbors : simulator.agent.LocatedAgent
_myShape : simulator.geometry.boundaryConditions.AllBC
_mySide : simulator.geometry.boundaryConditions.AllBC
_mySoluteIndex : simulator.reaction.Reaction
_n : utils.ComplexArray
_nCopy : simulator.agent.zoo.MultiEpisome , simulator.agent.zoo.Episome
_netGrowthRate : simulator.agent.ActiveAgent
_netVolumeRate : simulator.agent.ActiveAgent
_newLoc : simulator.agent.LocatedAgent
_newT : simulator.agent.zoo.MultiEpisome
_nI : simulator.geometry.Domain , simulator.SpatialGrid
_nJ : simulator.geometry.Domain , simulator.SpatialGrid
_nK : simulator.geometry.Domain , simulator.SpatialGrid
_ntot : utils.ComplexArray
_nTotal : simulator.detachment.ConnectedVolume
_originalSize : utils.ComplexArray
_particleNameYield : simulator.reaction.Reaction
_particleYield : simulator.reaction.Reaction
_pilusLength : simulator.agent.zoo.Episome
_population : simulator.agent.Species
_progenitor : simulator.agent.Species
_protocolFile : simulator.Simulator
_radius : simulator.agent.LocatedAgent
_reac : simulator.diffusionSolver.multigrid.MultigridSolute
_reacGrid : simulator.reaction.Reaction
_reactions : simulator.diffusionSolver.DiffusionSolver
_reactiveBiomass : simulator.diffusionSolver.Solver_chemostat
_referenceSystemSide : simulator.diffusionSolver.multigrid.MultigridSolute , simulator.diffusionSolver.multigrid.SinglegridPressure
_relDiff : simulator.diffusionSolver.multigrid.SinglegridPressure , simulator.diffusionSolver.multigrid.MultigridSolute
_reso : simulator.SpatialGrid
_resolution : simulator.geometry.Domain
_rhs : simulator.diffusionSolver.multigrid.MultigridSolute , simulator.diffusionSolver.multigrid.SinglegridPressure
_shoveGrid : simulator.detachment.ConnectedVolume
_shovingGrid : simulator.detachment.LevelSet
_sIn : simulator.geometry.Bulk
_solute : simulator.diffusionSolver.Solver_pressure , simulator.diffusionSolver.Solver_multigrid
_soluteIndex : simulator.diffusionSolver.DiffusionSolver
_soluteList : simulator.agent.zoo.BactAdaptableParam , simulator.reaction.Reaction , simulator.diffusionSolver.DiffusionSolver
_soluteYield : simulator.reaction.Reaction
_species : simulator.agent.SpecialisedAgent
_speciesParam : simulator.agent.SpecialisedAgent
_specRate : simulator.reaction.Reaction
_statedTimeStep : idyno.SimTimer
_timeSinceLastDivisionCheck : simulator.agent.LocatedAgent
_topOfBoundaryLayer : simulator.geometry.Domain
_totalMass : simulator.agent.ActiveAgent
_totalRadius : simulator.agent.LocatedAgent
_totalVolume : simulator.agent.LocatedAgent
_uptakeRate : simulator.reaction.Reaction
_validateInThisIteration : simulator.detachment.ConnectedVolume
_volume : simulator.agent.LocatedAgent