This is the complete list of members for simulator.agent.zoo.MultiEpisome, including all inherited members.

_agentGrid	simulator.agent.SpecialisedAgent	protected
_birthday	simulator.agent.Agent	protected
_family	simulator.agent.Agent	protected
_genealogy	simulator.agent.Agent	protected
_generation	simulator.agent.Agent	protected
_host	simulator.agent.zoo.MultiEpisome
_lastStep	simulator.agent.Agent	protected
_nCopy	simulator.agent.zoo.MultiEpisome
_newT	simulator.agent.zoo.MultiEpisome
_species	simulator.agent.SpecialisedAgent	protected
_speciesParam	simulator.agent.SpecialisedAgent	protected
Agent()	simulator.agent.Agent
allReactions	simulator.agent.zoo.MultiEpisome
clone()	simulator.agent.zoo.MultiEpisome
createNewAgent()	simulator.agent.zoo.MultiEpisome
death	simulator.agent.SpecialisedAgent
die()	simulator.agent.zoo.MultiEpisome
simulator::agent::InfoAgent.die(boolean isStarving)	simulator.agent.SpecialisedAgent
getCopyNumber()	simulator.agent.zoo.MultiEpisome
getGridIndex()	simulator.agent.SpecialisedAgent
getName()	simulator.agent.SpecialisedAgent
getPilusLength()	simulator.agent.zoo.MultiEpisome
getSpecies()	simulator.agent.SpecialisedAgent
getSpeciesParam()	simulator.agent.zoo.MultiEpisome
giveName()	simulator.agent.Agent
givePlasmid(double elapsedHGTtime)	simulator.agent.zoo.MultiEpisome
increaseCopyNumber()	simulator.agent.zoo.MultiEpisome
init()	simulator.agent.zoo.MultiEpisome
initFromProtocolFile(Simulator aSim, XMLParser xmlMarkUp)	simulator.agent.zoo.MultiEpisome
initFromResultFile(Simulator aSim, String[] singleAgentData)	simulator.agent.Agent
interact(boolean MUTUAL, boolean pull, boolean seq, double gain)	simulator.agent.SpecialisedAgent
internalStep()	simulator.agent.zoo.MultiEpisome	virtual
isDead	simulator.agent.SpecialisedAgent
isHot	simulator.agent.zoo.MultiEpisome
isMoving()	simulator.agent.SpecialisedAgent
isReadyToConjugate(double elapsedHGTtime)	simulator.agent.zoo.MultiEpisome
isTransConjugant()	simulator.agent.zoo.MultiEpisome
lastExchange	simulator.agent.zoo.MultiEpisome
makeKid()	simulator.agent.zoo.MultiEpisome
move()	simulator.agent.SpecialisedAgent
MultiEpisome()	simulator.agent.zoo.MultiEpisome
mutateAgent()	simulator.agent.zoo.MultiEpisome
mutatePop()	simulator.agent.zoo.MultiEpisome
nbhList	simulator.agent.zoo.MultiEpisome	protected
nextFamily	simulator.agent.Agent	protectedstatic
reactionActive	simulator.agent.zoo.MultiEpisome	protected
reactionKnown	simulator.agent.zoo.MultiEpisome	protected
receivedPlasmid()	simulator.agent.zoo.MultiEpisome
recordGenealogy(Agent baby)	simulator.agent.Agent	protected
registerBirth()	simulator.agent.zoo.MultiEpisome	virtual
replication()	simulator.agent.zoo.MultiEpisome
reset(MultiEpisome aPlasmid)	simulator.agent.zoo.MultiEpisome
segregation(MultiEpisome aPlasmid)	simulator.agent.zoo.MultiEpisome
sendHeader()	simulator.agent.zoo.MultiEpisome
sendName()	simulator.agent.Agent
sendNewAgent()	simulator.agent.zoo.MultiEpisome
setCopyNumber(int value)	simulator.agent.zoo.MultiEpisome
setDefaultCopyNumber()	simulator.agent.zoo.MultiEpisome
setHost(MultiEpiBac anHost)	simulator.agent.zoo.MultiEpisome
setInitialCopyNumber()	simulator.agent.zoo.MultiEpisome
setSpecies(Species aSpecies)	simulator.agent.SpecialisedAgent
setSpeciesParam(SpeciesParam aSpeciesParam)	simulator.agent.SpecialisedAgent
SpecialisedAgent()	simulator.agent.SpecialisedAgent
speciesIndex	simulator.agent.SpecialisedAgent
step()	simulator.agent.Agent
willDetach()	simulator.agent.SpecialisedAgent
writeOutput()	simulator.agent.zoo.MultiEpisome
writePOVColorDefinition(FileWriter fr)	simulator.agent.SpecialisedAgent